globalchange  > 气候减缓与适应
DOI: 10.1016/j.watres.2018.02.004
Scopus记录号: 2-s2.0-85042320832
论文题名:
A review on recent progress in the detection methods and prevalence of human enteric viruses in water
作者: Haramoto E.; Kitajima M.; Hata A.; Torrey J.R.; Masago Y.; Sano D.; Katayama H.
刊名: Water Research
ISSN: 431354
出版年: 2018
卷: 135
起始页码: 168
结束页码: 186
语种: 英语
英文关键词: Human enteric viruses ; Process control ; Viral metagenomics ; Virus detection method
Scopus关键词: Polymerase chain reaction ; Viruses ; Aquatic environments ; Biological applications ; Human enteric virus ; Maximum concentrations ; Metagenomics ; Quantitative polymerase chain reaction ; Reverse transcription ; Virus detection ; Process control ; water ; fresh water ; abundance ; aquatic environment ; concentration (composition) ; detection method ; disease prevalence ; feces ; genetic analysis ; genomics ; polymerase chain reaction ; public health ; viral disease ; virus ; water pollution ; aquatic environment ; enteric virus ; genetic variability ; maximum concentration ; nonhuman ; priority journal ; process control ; reverse transcription polymerase chain reaction ; Review ; virus detection ; virus genome ; classification ; Enterovirus ; Enterovirus infection ; feces ; genetics ; human ; isolation and purification ; polymerase chain reaction ; procedures ; virology ; Enterovirus ; Enterovirus Infections ; Feces ; Fresh Water ; Genome, Viral ; Humans ; Polymerase Chain Reaction
英文摘要: Waterborne human enteric viruses, such as noroviruses and adenoviruses, are excreted in the feces of infected individuals and transmitted via the fecal-oral route including contaminated food and water. Since viruses are normally present at low concentrations in aquatic environments, they should be concentrated into smaller volumes prior to downstream molecular biological applications, such as quantitative polymerase chain reaction (qPCR). This review describes recent progress made in the development of concentration and detection methods of human enteric viruses in water, and discusses their applications for providing a better understanding of the prevalence of the viruses in various types of water worldwide. Maximum concentrations of human enteric viruses in water that have been reported in previous studies are summarized to assess viral abundances in aquatic environments. Some descriptions are also available on recent applications of sequencing analyses used to determine the genetic diversity of viral genomes in water samples, including those of novel viruses. Furthermore, the importance and significance of utilizing appropriate process controls during viral analyses are discussed, and three types of process controls are considered: whole process controls, molecular process controls, and (reverse transcription (RT)-)qPCR controls. Although no standards have been established for acceptable values of virus recovery and/or extraction-(RT-)qPCR efficiency, use of at least one of these appropriate control types is highly recommended for more accurate interpretation of observed data. © 2018 The Authors
Citation statistics:
资源类型: 期刊论文
标识符: http://119.78.100.158/handle/2HF3EXSE/112884
Appears in Collections:气候减缓与适应

Files in This Item:

There are no files associated with this item.


作者单位: Interdisciplinary Center for River Basin Environment, Graduate Faculty of Interdisciplinary Research, University of Yamanashi, 4-3-11 Takeda, Kofu, Yamanashi 400-8511, Japan; Division of Environmental Engineering, Faculty of Engineering, Hokkaido University, North 13 West 8, Kita-ku, Sapporo, Hokkaido, 060-8628, Japan; Integrated Research System for Sustainability Science, Institutes for Advanced Study, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8654, Japan; School of Architecture, Civil and Environmental Engineering, École Polytechnique Fédérale de Lausanne, Lausanne, 1015, Switzerland; Institute for the Advanced Study of Sustainability, United Nations University, 5-53-70 Jingumae, Shibuya-ku, Tokyo, 150-8925, Japan; Department of Civil and Environmental Engineering, Graduate School of Engineering, Tohoku University, Aoba 6-6-06, Aramaki, Aoba-ku, Sendai, Miyagi 980-8579, Japan; Department of Urban Engineering, Graduate School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8656, Japan; Vietnam Japan University, Luu Huu Phuoc Road, My Dinh 1 Ward, Nam Tu Liem District, Ha Noi, Viet Nam

Recommended Citation:
Haramoto E.,Kitajima M.,Hata A.,et al. A review on recent progress in the detection methods and prevalence of human enteric viruses in water[J]. Water Research,2018-01-01,135
Service
Recommend this item
Sava as my favorate item
Show this item's statistics
Export Endnote File
Google Scholar
Similar articles in Google Scholar
[Haramoto E.]'s Articles
[Kitajima M.]'s Articles
[Hata A.]'s Articles
百度学术
Similar articles in Baidu Scholar
[Haramoto E.]'s Articles
[Kitajima M.]'s Articles
[Hata A.]'s Articles
CSDL cross search
Similar articles in CSDL Cross Search
[Haramoto E.]‘s Articles
[Kitajima M.]‘s Articles
[Hata A.]‘s Articles
Related Copyright Policies
Null
收藏/分享
所有评论 (0)
暂无评论
 

Items in IR are protected by copyright, with all rights reserved, unless otherwise indicated.