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Hydrological processes in hilly watersheds are significantly affected by variations in elevation; however, the hydrological functions of different vertical vegetation belts, have rarely been reported. The distributed hydrological model WEP-L (Water and Energy transfer Process in Large river basins) was applied to analyse vertical variations in the hydrological processes of Qingshui River basin (QRB), Wutai Mountain (altitude: 3058 m a.s.l.), China. The results show that the highest ratio of evapotranspiration to precipitation occurs at 1800 m a.s.l. Below 1800 m, evapotranspiration is mainly controlled by precipitation, and in regions above1800 m it is controlled by energy. The runoff coefficients for different vertical vegetation belts may be ranked as follows: farmland > grassland > subalpine meadow > evergreen coniferous shrub forest > deciduous broad-leaved forest. Grassland is the largest runoff production area, contributing approximately 39.10% to the annual water yield of the QRB. The runoff from forested land decreased to a greater extent than the grassland runoff. Increasing forest cover may increase evapotranspiration and reduce runoff. These results are important, not only for further understanding of the hydrological mechanisms in this basin, but also for implementing the sustainable management of water resources and ecosystems in other mountainous regions.