The analysis of the characteristics and footprint climatology of farmland water and heat fluxes has great significance to strengthen regional climate resource management and improve the hydrothermal resource utilization in the region of red soil. Based on quality controlled data from large aperture scintillometer and automatic meteorological station in hilly region of red soil,this paper analyzed in detail the characteristics of farmland water and heat fluxes at different temporal scales and the corresponding source area distribution of flux measurement in the non-rainy season and crop growth period in hilly region of red soil. The results showed that the diurnal variation of water and heat fluxes showed a unimodal trend,but compared with the sunny day,the diurnal variation curves fluctuated more complicatedly on cloudy day. In the whole,either ten-day periods or month scale, the water and heat fluxes were greater in August than in September,while the net radiation flux was more distributed to latent heat exchange. The proportion of net radiation to latent heat flux decreased in September compared to August,but the sensible heat flux was vice versa. With combined effects of weather conditions (particularly wind), stability,and surface condition,the source areas of flux measurement at different temporal scales showed different distribution characteristics. Combined with the underlying surface crops,the source areas at different temporal scales also had different contribution sources.