globalchange  > 过去全球变化的重建
DOI: 10.1371/journal.pone.0108767
论文题名:
Comparing Bacterial Community Composition of Healthy and Dark Spot-Affected Siderastrea siderea in Florida and the Caribbean
作者: Christina A. Kellogg; Yvette M. Piceno; Lauren M. Tom; Todd Z. DeSantis; Michael A. Gray; Gary L. Andersen
刊名: PLOS ONE
ISSN: 1932-6203
出版年: 2014
发表日期: 2014-10-7
卷: 9, 期:10
语种: 英语
英文关键词: Corals ; Coral reefs ; Virgin Islands ; Microarrays ; Bacterial pathogens ; DNA extraction ; Fungal genetics ; Ribosomal RNA
英文摘要: Coral disease is one of the major causes of reef degradation. Dark Spot Syndrome (DSS) was described in the early 1990's as brown or purple amorphous areas of tissue on a coral and has since become one of the most prevalent diseases reported on Caribbean reefs. It has been identified in a number of coral species, but there is debate as to whether it is in fact the same disease in different corals. Further, it is questioned whether these macroscopic signs are in fact diagnostic of an infectious disease at all. The most commonly affected species in the Caribbean is the massive starlet coral Siderastrea siderea. We sampled this species in two locations, Dry Tortugas National Park and Virgin Islands National Park. Tissue biopsies were collected from both healthy colonies and those with dark spot lesions. Microbial-community DNA was extracted from coral samples (mucus, tissue, and skeleton), amplified using bacterial-specific primers, and applied to PhyloChip G3 microarrays to examine the bacterial diversity associated with this coral. Samples were also screened for the presence of a fungal ribotype that has recently been implicated as a causative agent of DSS in another coral species, but the amplifications were unsuccessful. S. siderea samples did not cluster consistently based on health state (i.e., normal versus dark spot). Various bacteria, including Cyanobacteria and Vibrios, were observed to have increased relative abundance in the discolored tissue, but the patterns were not consistent across all DSS samples. Overall, our findings do not support the hypothesis that DSS in S. siderea is linked to a bacterial pathogen or pathogens. This dataset provides the most comprehensive overview to date of the bacterial community associated with the scleractinian coral S. siderea.
URL: http://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0108767&type=printable
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资源类型: 期刊论文
标识符: http://119.78.100.158/handle/2HF3EXSE/18300
Appears in Collections:过去全球变化的重建
影响、适应和脆弱性
科学计划与规划
气候变化与战略
全球变化的国际研究计划
气候减缓与适应
气候变化事实与影响

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作者单位: U.S. Geological Survey, St. Petersburg Coastal and Marine Science Center, St. Petersburg, Florida, United States of America;Lawrence Berkeley National Laboratory, Berkeley, California, United States of America;Lawrence Berkeley National Laboratory, Berkeley, California, United States of America;Second Genome, Inc., San Bruno, California, United States of America;U.S. Geological Survey, St. Petersburg Coastal and Marine Science Center, St. Petersburg, Florida, United States of America;Lawrence Berkeley National Laboratory, Berkeley, California, United States of America

Recommended Citation:
Christina A. Kellogg,Yvette M. Piceno,Lauren M. Tom,et al. Comparing Bacterial Community Composition of Healthy and Dark Spot-Affected Siderastrea siderea in Florida and the Caribbean[J]. PLOS ONE,2014-01-01,9(10)
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